Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

site updates: fix some usage informations, make authorship clear, add logo #212

Merged
merged 10 commits into from
Aug 7, 2024

Conversation

McHaillet
Copy link
Collaborator

@McHaillet McHaillet commented Aug 7, 2024

Some updates for the site (see title).

Closes #208

@McHaillet McHaillet requested a review from sroet August 7, 2024 19:30
Copy link

github-actions bot commented Aug 7, 2024

File Coverage Missing
All files 87%
src/pytom_tm/correlation.py 85% 97-98 129
src/pytom_tm/entry_points.py 79% 28 111-128 231-276 379-398 531-549 996-1007
src/pytom_tm/extract.py 76% 122-133 198-205 247-252 344-362
src/pytom_tm/io.py 80% 19 40 58 76 88 108-115 131-135 143 150 161 168 214-216 280 316-319 420-428 453
src/pytom_tm/mask.py 80% 72 90 100-101
src/pytom_tm/parallel.py 89% 14-15 89 100-101 107 170
src/pytom_tm/plotting.py 16% 19-21 24-31 35-43 47-50 53-69 72-73 76-77 97-102 118-126 132-149 164-172 176-193 197-205 209-216 222 228 233 247-395
src/pytom_tm/tmjob.py 97% 301-302 318 327-331 403 524 568
src/pytom_tm/utils.py 78% 17-19
src/pytom_tm/weights.py 96% 57 304-307 314 519 524 529

Minimum allowed coverage is 86%

Generated by 🐒 cobertura-action against e0834b8

Copy link
Collaborator

@sroet sroet left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

1 question and a suggestion we can split out into a separate issue.

LGTM, feel free to merge

DOI = {10.3390/ijms241713375}
}
```
Chaillet, M. L., van der Schot, G., Gubins, I., Roet, S., Veltkamp, R. C., & Förster, F. (2023). Extensive angular sampling enables the sensitive localization of macromolecules in electron tomograms. _International Journal of Molecular Sciences_, 24(17), 13375. <https://doi.org/10.3390/ijms241713375>
Copy link
Collaborator

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

We should probably add a citation file as well

Copy link
Collaborator Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

To the repository you mean right? Will make it an issue.

Copy link
Collaborator

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Yeah, I meant to the repository

mkdocs.yml Outdated Show resolved Hide resolved
@McHaillet McHaillet merged commit 1d7d238 into SBC-Utrecht:main Aug 7, 2024
2 checks passed
@McHaillet McHaillet deleted the update_docs branch August 7, 2024 20:53
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Quesion about the appropriate tomograms for pytom picking
2 participants